Phred :: Install

Phred

The installation is in the server
working directory: /bioinfo/packages/Phred

Copy the phred-dist-020425.c-acd.tar.Z to above directory
$ uncompress phred-dist-020425.c-acd.tar.Z
$ tar xvf phred-dist-020425.c-acd.tar

Edit makefile to uncomment lines for 'UNIX specific definitions'
$ make

To set the environment variable
$ export PHRED_PARAMETER_FILE=\usr\local\etc\PhredPar\phredpar.dat

== Now ready to run phred

phd2fasta package
move the package to the working directory
$ uncompress phd2fasta-acd-dist.tar.Z
$ tar xvf phd2fasta-acd-dist.tar
$ make

The program can be executed as ./phd2fasta