Tuesday, April 12, 2011

Cytoscape :: Plugins :: Download

Plugins > Manage Plugins > Keyword search for plugin

Downloading plugin for Multicolored Node, where each node is divided into pie depending on the attribute. Additional notes is present at http://groups.google.com/group/cytoscape-discuss/browse_thread/thread/12ccc21ae5756778

To download and install a plugin
Go to
$ cd ~/Cytoscape_v2.8.1/plugins
$ wget http://url.to.site/multicolor
Restart Cytoscape to include it in Cytoscape.

A rainbow wheel named color nodes should appear on top of the window.

Intersting Plugins:
Venn Diagram: http://www.dishevelled.org/venn-cytoscape-plugin/
User-defined: http://www.genmapp.org/BubbleRouter/manual.htm

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