Program :: FASTA

Download url: ftp://ftp.ebi.ac.uk/pub/software/unix/fasta/CURRENT/fasta-36.3.4.tar.gz

$ wget ftp://ftp.ebi.ac.uk/pub/software/unix/fasta/CURRENT/fasta-36.3.4.tar.gz
$ tar zxvf fasta-36.3.4.tar.gz
$ cd fasta-36.3.4


$ cd src/

$ make -f ../make/Makefile.linux_sse2 all

$ cd ..

$ .bin/fasta36 --help

$ /bin/fasta36 -d 10 -E 1e-20 -q input.fasta database.fasta -O fasta.output